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plurigrid skills

Find 1178 skills from 1 repo created by plurigrid on GitHub.

1 repo

1178 skills

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persistent-homology

plurigrid/asi

This skill verifies code stability across complexity filtrations using persistent homology to identify durable structural features and filter noise.

plurigrid/asi

Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.

goblins-adapter

plurigrid/asi

This skill helps you integrate ElizaOS plugins with Goblins OCapN, translating actions, providers, and services into-capability based interactions for secure,

plurigrid/asi

A friendly greeter skill

plurigrid/asi

Set up and manage local Kubernetes clusters using KIND (Kubernetes IN Docker). Use when testing Kubernetes applications locally or developing cloud-native workloads.

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plurigrid/asi

High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.

plurigrid/asi

Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.

plurigrid/asi

This skill helps you manage Ergodic World H operations and Aptos actions through MCP tools for balance, transfer, swap, stake, and view.

sheaf-theoretic-coordination

plurigrid/asi

This skill enables distributed coordination using sheaf theory to achieve consensus, infer missing data, and detect obstructions in multi-agent systems.

plurigrid/asi

Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties, biomarker data, NMR/MS spectra, pathways, for metabolomics and identification.

hogwash-removal

plurigrid/asi

This skill audits code and documents for category theorem misuses, cargo-cult claims, and overclaims to improve math communication accuracy.

mcp-integration

plurigrid/asi

This skill should be used when the user asks to "add MCP server", "integrate MCP", "configure MCP in plugin", "use .mcp.json", "set up Model Context Protocol", "connect external service", mentions "${CLAUDE_PLUGIN_ROOT} with MCP", or discusses MCP server types (SSE, stdio, HTTP, WebSocket). Provides comprehensive guidance for integrating Model Context Protocol servers into Claude Code plugins for external tool and service integration.

plurigrid/asi

This skill applies Hom(A,-) and Hom(-,B) representables to analyze mappings and improve abstractions in functional programming contexts.

messaging-world

plurigrid/asi

This skill analyzes cross-channel social graphs from Outlook, Gmail, and Beeper to help you understand connections and network structure.

plurigrid/asi

Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis.

plurigrid/asi

This skill helps you explore SICP concepts and apply abstraction and metalinguistic design to plan, reason, and implement computational ideas.

how-to-write-rulebooks

plurigrid/asi

This skill guides you to author, structure, and publish high-quality Rulebooks in Stakpak with a reusable, standardized workflow.

get-available-resources

plurigrid/asi

This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to use parallel processing (joblib, multiprocessing), out-of-core computing (Dask, Zarr), GPU acceleration (PyTorch, JAX), or memory-efficient strategies. Use this skill before running analyses, training models, processing large datasets, or any task where resource constraints matter.

infinity-categories

plurigrid/asi

This skill enables you to model and reason about infinity-categories, Kan complexes, and Segal spaces to organize complex topological data workflows.

plurigrid/asi

Safely analyzes and cleans up local git branches and worktrees by categorizing them as merged, squash-merged, superseded, or active work.

gh-address-comments

plurigrid/asi

Help address review/issue comments on the open GitHub PR for the current branch using gh CLI; verify gh auth first and prompt the user to authenticate if not logged in.

plurigrid/asi

This skill helps you apply higher topos theory concepts to BCIs, enabling ∞-topos, HoTT, and descent reasoning for robust data interpretation.

information-geometry

plurigrid/asi

This skill applies information geometry concepts to analyze distributions with Fisher-Rao metric, enabling natural gradient optimization and divergence

plurigrid/asi

This skill initializes a repository by generating an AGENTS.md contributor guide with clear sections and actionable instructions.

infrastructure-software-upgrades

plurigrid/asi

This skill guides you through reliable infrastructure upgrades by identifying current versions, researching changes, and validating rollback and tests.

venue-templates

plurigrid/asi

Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant proposals (NSF, NIH, DOE, DARPA). This skill should be used when preparing manuscripts for journal submission, conference papers, research posters, or grant proposals and need venue-specific formatting requirements and templates.

spectral-gap-analyzer

plurigrid/asi

This skill analyzes proof system health by measuring Laplacian eigenvalue gaps in proof graphs to reveal connectivity and tangles.

plurigrid/asi

This skill helps you compile Clojure-like code to native LLVM with seamless C++ interop and runtime optimizations.

plurigrid/asi

This skill validates and analyzes The Sims DBPF packages, parsing structures, detecting version, listing resources, and batch-scanning save directories for

joker-sims-parser

plurigrid/asi

This skill parses Sims DBPF packages across versions, validates integrity, and reports resource metadata to help analyze and extract saves.

plurigrid/asi

This skill enforces graft as the preferred build system for Basin agents, replacing cargo for builds, tests, and quality checks to ensure consistency.

derived-categories

plurigrid/asi

This skill applies homological algebra concepts to derive categories and spectral sequences to organize and analyze complex structures.

tailscale-file-transfer

plurigrid/asi

This skill enables peer-to-peer file transfers over a Tailscale mesh using open games semantics and bidirectional lens for reliable, explainable outcomes.

plurigrid/asi

This skill helps you manage Ergodic World K operations by interfacing with MCP tools for balances, transfers, swaps, and governance.

plurigrid/asi

This skill evaluates molecular complexity using assembly index to detect biosignatures by computing minimal assembly steps and applying a life threshold.

plurigrid/asi

This skill helps users understand and troubleshoot Kimi Code CLI usage, installation, and configuration through official docs and source insights.

covariant-fibrations

plurigrid/asi

This skill helps you validate covariant fibrations and transport along directed intervals, ensuring correct type propagation in dependent type workflows.

unworlding-involution

plurigrid/asi

This skill extracts frame-invariant self patterns from 3-MATCH dynamics, applying involution to reveal self across frames and maintain GF(3) conservation.

system2-attention

plurigrid/asi

This skill validates and refines transformer attention by regenerating context and performing a deliberate second pass to improve reasoning and factual

plurigrid/asi

This skill helps you understand, validate, and use agent skills by guiding frontmatter, structure, and progressive disclosure for reliable integrations.

neuropixels-analysis

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Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when working with neural recordings, spike sorting, extracellular electrophysiology, or when the user mentions Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, or unit curation.

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Automated hypothesis generation and testing using large language models. Use this skill when generating scientific hypotheses from datasets, combining literature insights with empirical data, testing hypotheses against observational data, or conducting systematic hypothesis exploration for research discovery in domains like deception detection, AI content detection, mental health analysis, or other empirical research tasks.

plurigrid/asi

This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR. Use when managing biological datasets (scRNA-seq, spatial, flow cytometry, etc.), tracking computational workflows, curating and validating data with biological ontologies, building data lakehouses, or ensuring data lineage and reproducibility in biological research. Covers data management, annotation, ontologies (genes, cell types, diseases, tissues), schema validation, integrations with workflow managers (Nextflow, Snakemake) and MLOps platforms (W&B, MLflow), and deployment strategies.

active-interleave

plurigrid/asi

This skill interleaves context from recent Claude/Amp threads to reduce uncertainty and accelerate current task insight.

analytics-tracking

plurigrid/asi

When the user wants to set up, improve, or audit analytics tracking and measurement. Also use when the user mentions "set up tracking," "GA4," "Google Analytics," "conversion tracking," "event tracking," "UTM parameters," "tag manager," "GTM," "analytics implementation," or "tracking plan." For A/B test measurement, see ab-test-setup.

algorand-vulnerability-scanner

plurigrid/asi

This skill scans Algorand smart contracts for 11 vulnerabilities to help auditors detect rekeying, missing validations, and access control flaws.

plurigrid/asi

This skill helps you initiate Aptos testnet transactions using the ALICE wallet, enabling balance checks, transfers, and staking with MCP tools.

plurigrid/asi

This skill helps you generate and wire code from CUE schemas into a VS Code coding agent, accelerating automated software creation.

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Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.

plurigrid/asi

Upgrade Next.js to the latest version following official migration guides and codemods

workspace-unified

plurigrid/asi

This skill integrates Google Workspace actions into an ACSet-structured workflow, preserving trit balance across Gmail, Drive, Calendar, Tasks, Docs for

layerchart-svelte5

plurigrid/asi

LayerChart Svelte 5 patterns. Use for chart components with tooltip snippets, Chart context access, and all Svelte 5 snippet patterns for tooltips, gradients, highlights, and axes.

how-to-publish-paks

plurigrid/asi

This skill guides you through creating, validating, and publishing high-quality Agent Skills to the Paks registry, ensuring correct frontmatter, versioning,

lean4-music-topos

plurigrid/asi

This skill helps verify complex music topology proofs across spectral gap, color harmony, CRDT correctness, and learning guarantees using Lean4 formalization.

plurigrid/asi

This skill analyzes and explains Worldmat-Tidar's 3x3x3 TiDAR matrix to help you understand topological computation and triad dynamics.

literature-review

plurigrid/asi

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).

louisville-quantum-gravity

plurigrid/asi

This skill helps you analyze KPZ stationary measures in open boundary quantum gravity settings, delivering phase diagrams and analytic continuation insights.

plurigrid/asi

A test skill that responds to the magic word "flarglebargle" with a compliment. Use for testing skill activation and trigger functionality.

market-research-reports

plurigrid/asi

Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with research-lookup for data gathering, and multi-framework strategic analysis including Porter's Five Forces, PESTLE, SWOT, TAM/SAM/SOM, and BCG Matrix.

notion-spec-to-implementation

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Turn Notion specs into implementation plans, tasks, and progress tracking; use when implementing PRDs/feature specs and creating Notion plans + tasks from them.

marketing-psychology

plurigrid/asi

When the user wants to apply psychological principles, mental models, or behavioral science to marketing. Also use when the user mentions 'psychology,' 'mental models,' 'cognitive bias,' 'persuasion,' 'behavioral science,' 'why people buy,' 'decision-making,' or 'consumer behavior.' This skill provides 70+ mental models organized for marketing application.

plurigrid/asi

This skill helps you humanize written text by removing AI-sounding patterns, adding voice, and improving readability across documents.

plurigrid/asi

This skill enables secure Aptos blockchain operations through MCP tools, coordinating parallel worlds with triadic constraints and efficient task execution.

flowglad-integration

plurigrid/asi

This skill automates zero-webhook billing for AI agents by generating polling-based checkout flows and ledger-driven usage metering.

openalex-database

plurigrid/asi

Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly works. Use for literature searches, research output analysis, citation analysis, and academic database queries.

plurigrid/asi

This skill helps you explore and apply artificial life concepts from ALIFE2025, classic texts, Lenia, NCA, and swarm models to design emergent systems.

initial-terminal

plurigrid/asi

This skill manages initial and terminal objects, enabling lightweight state handling and self-improvement through interaction, memory, and worlding.

plurigrid/asi

This skill helps you monitor Amp usage by estimating local sessions, listing GitHub org members, and checking recent thread activity.

web-design-guidelines

plurigrid/asi

Review UI code for Web Interface Guidelines compliance. Use when asked to "review my UI", "check accessibility", "audit design", "review UX", or "check my site against best practices".

plurigrid/asi

This skill helps you verify binary behavior and defense equivalence using miasm symbolic execution and bisimulation across architectures.

aqua-voice-malleability

plurigrid/asi

This skill helps security researchers analyze Aqua Voice malleability by coordinating braided monoidal interleaving and IPC/WebSocket insights.

plurigrid/asi

This skill helps you manage version control with jj, streamlining conflict handling, undo, and revsets for faster, safer project history.

join-semilattice

plurigrid/asi

This skill helps you model join semilattices and preserve sup principles within data-driven updates across components and algorithms.

plurigrid/asi

This skill guides modern Python project setup and tooling, helping you configure pyproject.toml, dependency management, and quality tooling with uv.

plurigrid/asi

This skill enables self-modifying agent configurations and autonomous capability management, improving adaptability and consistency across agents by enforcing

move-narya-bridge

plurigrid/asi

This skill translates Move module invariants into Narya proof obligations, enabling automatic function extensionality and formal verification through

move-smart-contract-audit

plurigrid/asi

This skill audits Move smart contracts through a six-layer security pipeline including static analysis, formal verification, fuzzing, and dynamic testing.

plurigrid/asi

This skill explains and applies a distributed object capability approach to enable secure peer-to-peer interactions using CapTP.

bidirectional-lens-logic

plurigrid/asi

This skill analyzes bidirectional-lens-logic to help you reason about covariant, contravariant, invariant and bivariant types across programs.

plurigrid/asi

This skill helps you manage World N Aptos operations with MCP tools for balance, transfer, swap, stake, and read-only views.

plurigrid/asi

This skill helps you solve Nash equilibria for open games using a PyTorch-backed solver and OpenClaw tooling.

plurigrid/asi

This skill helps you encode Minecraft NBT data and text components using the nbt!

birkhoff-average

plurigrid/asi

This skill computes the time average of an observable along a trajectory to analyze long term dynamics and stability.

network-forensics

plurigrid/asi

This skill helps you perform fast network forensics by guiding packet capture, triage, and analysis using tcpdump, tshark, and Zeek for authorized testing.

plurigrid/asi

This skill bootstraps new Claude instances by loading GF(3)-balanced skill triads from plurigrid/asi and announcing progress.

plugin-settings

plurigrid/asi

This skill should be used when the user asks about "plugin settings", "store plugin configuration", "user-configurable plugin", ".local.md files", "plugin state files", "read YAML frontmatter", "per-project plugin settings", or wants to make plugin behavior configurable. Documents the .claude/plugin-name.local.md pattern for storing plugin-specific configuration with YAML frontmatter and markdown content.

local-compositionality-gadget

plurigrid/asi

This skill applies local compositionality dynamics to maintain GF(3) conservation while coordinating triadic gadget updates.

omero-integration

plurigrid/asi

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

burpsuite-project-parser

plurigrid/asi

This skill searches and analyzes Burp Suite project files from the command line to extract findings and map HTTP traffic.

iso-13485-certification

plurigrid/asi

Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO 13485 QMS documentation, including (1) conducting gap analysis of existing documentation, (2) creating Quality Manuals, (3) developing required procedures and work instructions, (4) preparing Medical Device Files, (5) understanding ISO 13485 requirements, or (6) identifying missing documentation for medical device certification. Also use when users mention medical device regulations, QMS certification, FDA QMSR, EU MDR, or need help with quality system documentation.

plurigrid/asi

This skill helps you explore and simulate diffusion on cellular sheaves with learnable restriction maps using Rust-based neural networks.

plurigrid/asi

This skill analyzes Hopf bifurcation in dynamical systems to identify limit cycles emerging from equilibria and informs stability and long-term behavior.

plurigrid/asi

This skill helps you manage World L blockchain operations via MCP tools for balance, transfer, swap, stake, and view.

pubchem-database

plurigrid/asi

Query PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics.

plurigrid/asi

This skill helps you orchestrate interdisciplinary development across Clojure, Julia, Python, and multimedia with deterministic Gay coloring.

plurigrid/asi

This skill extracts and audits claims from documentation, code, and tests to populate the norvid claim tracking system.

security-best-practices

plurigrid/asi

Perform language and framework specific security best-practice reviews and suggest improvements. Trigger only when the user explicitly requests security best practices guidance, a security review/report, or secure-by-default coding help. Trigger only for supported languages (python, javascript/typescript, go). Do not trigger for general code review, debugging, or non-security tasks.

catcolab-schemas

plurigrid/asi

This skill helps you design clear CatColab schemas by separating entities from attributes and defining mappings for robust ACSets.

plurigrid/asi

This skill provides a zero-dependency VT sequence parser library extraction for terminal emulation, enabling fast ANSI/VT parsing and stateful handling.

plurigrid/asi

This skill helps you design and analyze GNU Radio flowgraphs with GF(3) trit tagging, enabling signal processing optimization across hardware peripherals.